7 homologs were found in PanDaTox collection
for query gene Gbem_1062 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_1062  von Willebrand factor type A  100 
 
 
357 aa  725    Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3199  von Willebrand factor type A  86.68 
 
 
368 aa  640    Geobacter sp. M21  Bacteria  n/a    normal  0.930737 
 
 
-
 
NC_010676  Bphyt_4623  von Willebrand factor type A  29.7 
 
 
451 aa  73.9  0.000000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  0.422892  normal 
 
 
-
 
NC_011365  Gdia_3496  hypothetical protein  27.59 
 
 
568 aa  54.3  0.000003  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.280319  normal  0.0769646 
 
 
-
 
NC_009719  Plav_0227  von Willebrand factor type A  30.08 
 
 
436 aa  52.8  0.000009  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2733  von Willebrand factor type A  27.7 
 
 
406 aa  47.4  0.0004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010511  M446_5903  hypothetical protein  29.66 
 
 
417 aa  44.7  0.003  Methylobacterium sp. 4-46  Bacteria  normal  0.336697  normal 
 
 
-
 
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