56 homologs were found in PanDaTox collection
for query gene GSU1176 on replicon NC_002939
Organism: Geobacter sulfurreducens PCA



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002939  GSU1176  fumarate reductase, cytochrome b subunit, putative  100 
 
 		 220 aa  438  9.999999999999999e-123  Geobacter sulfurreducens PCA  Bacteria  decreased coverage  0.000804206  n/a   
 
 
-
 
NC_007517  Gmet_2397  succinate dehydrogenase subunit C  85.45 
 
 		 220 aa  384  1e-106  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000000000000157614  normal  1 
 
 
-
 
NC_011146  Gbem_3334  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  59.55 
 
 		 221 aa  283  2.0000000000000002e-75  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000562871  n/a   
 
 
-
 
NC_012918  GM21_0912  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  59.09 
 
 		 221 aa  281  6.000000000000001e-75  Geobacter sp. M21  Bacteria  n/a    hitchhiker  8.63584e-33 
 
 
-
 
NC_009483  Gura_3257  succinate dehydrogenase/fumarate reductase cytochrome b subunit  63.18 
 
 		 219 aa  273  1.0000000000000001e-72  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000103645  n/a   
 
 
-
 
NC_008609  Ppro_2483  succinate dehydrogenase/fumarate reductase cytochrome b subunit  55.2 
 
 		 221 aa  254  9e-67  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00000000324383  n/a   
 
 
-
 
NC_010814  Glov_2214  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  54.05 
 
 		 222 aa  239  2e-62  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00000205713  n/a   
 
 
-
 
NC_007760  Adeh_2934  succinate dehydrogenase subunit C  53.67 
 
 		 221 aa  235  5.0000000000000005e-61  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_3127  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  53.67 
 
 		 221 aa  231  8.000000000000001e-60  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_3020  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  53.67 
 
 		 221 aa  231  8.000000000000001e-60  Anaeromyxobacter sp. K  Bacteria  normal  0.197929  n/a   
 
 
-
 
NC_007498  Pcar_0446  succinate dehydrogenase/fumarate reductase, cytochrome b subunit  46.26 
 
 		 223 aa  182  3e-45  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000000043641  n/a   
 
 
-
 
NC_010655  Amuc_0986  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  40.09 
 
 		 233 aa  149  3e-35  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.190764  normal  0.959903 
 
 
-
 
NC_011145  AnaeK_2722  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  36.99 
 
 		 221 aa  147  1.0000000000000001e-34  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_2636  succinate dehydrogenase subunit C  36.99 
 
 		 232 aa  146  2.0000000000000003e-34  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.189962  n/a   
 
 
-
 
NC_011891  A2cp1_2817  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  36.53 
 
 		 221 aa  145  5e-34  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.893711  n/a   
 
 
-
 
NC_010571  Oter_0671  succinate dehydrogenase/fumarate reductase cytochrome b subunit  36.25 
 
 		 253 aa  143  2e-33  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009675  Anae109_2602  succinate dehydrogenase/fumarate reductase cytochrome b subunit  37.73 
 
 		 230 aa  137  2e-31  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013440  Hoch_5881  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  35.78 
 
 		 228 aa  136  3.0000000000000003e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0369538  normal  1 
 
 
-
 
NC_009972  Haur_1734  succinate dehydrogenase/fumarate reductase cytochrome b subunit  37.27 
 
 		 223 aa  134  8e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.776584  n/a   
 
 
-
 
NC_009767  Rcas_3079  succinate dehydrogenase/fumarate reductase cytochrome b subunit  34.65 
 
 		 226 aa  131  1.0000000000000001e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009943  Dole_1555  succinate dehydrogenase/fumarate reductase cytochrome b subunit  38.79 
 
 		 212 aa  129  3e-29  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_3465  succinate dehydrogenase subunit C  35.4 
 
 		 246 aa  122  5e-27  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_2400  succinate dehydrogenase/fumarate reductase cytochrome b subunit  35.53 
 
 		 226 aa  120  1.9999999999999998e-26  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_5262  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  31.3 
 
 		 256 aa  109  3e-23  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.277764 
 
 
-
 
NC_013510  Tcur_1123  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  28.51 
 
 		 232 aa  107  1e-22  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_3551  succinate dehydrogenase subunit C  32.44 
 
 		 233 aa  105  5e-22  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_0384  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  31.86 
 
 		 234 aa  102  6e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.556008  normal  0.820054 
 
 
-
 
NC_011831  Cagg_1576  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  30.67 
 
 		 239 aa  101  8e-21  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.790909  normal  1 
 
 
-
 
NC_013169  Ksed_23340  succinate dehydrogenase/fumarate reductase cytochrome b subunit, b558 family  31.65 
 
 		 231 aa  101  1e-20  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010803  Clim_2443  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  31.75 
 
 		 231 aa  99.8  3e-20  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_008639  Cpha266_0102  succinate dehydrogenase subunit C  30.81 
 
 		 242 aa  98.6  6e-20  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_0210  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  33.49 
 
 		 209 aa  98.2  9e-20  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.178557 
 
 
-
 
NC_013757  Gobs_1054  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  30.94 
 
 		 231 aa  97.4  1e-19  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_3969  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  33.94 
 
 		 223 aa  97.8  1e-19  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.539858  normal  0.938313 
 
 
-
 
NC_008255  CHU_2472  succinate dehydrogenase subunit C  31.39 
 
 		 234 aa  97.1  2e-19  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  0.088296 
 
 
-
 
NC_011060  Ppha_2853  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  31.75 
 
 		 220 aa  96.7  3e-19  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007512  Plut_2082  succinate dehydrogenase, cytochrome b558 subunit  31.13 
 
 		 217 aa  95.9  4e-19  Chlorobium luteolum DSM 273  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_1278  succinate dehydrogenase/fumarate reductase cytochrome b subunit  31.86 
 
 		 234 aa  95.5  5e-19  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.563199 
 
 
-
 
NC_013595  Sros_8458  succinate dehydrogenase, cytochrome b subunit  30.43 
 
 		 253 aa  94.7  1e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.70376  normal  1 
 
 
-
 
NC_009380  Strop_1710  succinate dehydrogenase/fumarate reductase cytochrome b subunit  30.74 
 
 		 227 aa  94.4  1e-18  Salinispora tropica CNB-440  Bacteria  normal  0.0407721  normal  0.47892 
 
 
-
 
NC_013730  Slin_5011  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  29.28 
 
 		 231 aa  91.3  1e-17  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013162  Coch_0242  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  28.5 
 
 		 224 aa  86.3  3e-16  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.463951  n/a   
 
 
-
 
NC_013132  Cpin_6536  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  31.11 
 
 		 229 aa  85.9  4e-16  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0147302  normal  0.421545 
 
 
-
 
NC_007333  Tfu_2453  succinate dehydrogenase subunit C  30.6 
 
 		 238 aa  84  0.000000000000002  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_1707  succinate dehydrogenase/fumarate reductase cytochrome b subunit  29.18 
 
 		 230 aa  82  0.000000000000007  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.00155149 
 
 
-
 
NC_014151  Cfla_1918  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  31.34 
 
 		 248 aa  78.6  0.00000000000006  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.48387  normal  1 
 
 
-
 
NC_014210  Ndas_3923  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  27.83 
 
 		 235 aa  78.2  0.0000000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014148  Plim_2451  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  28.44 
 
 		 263 aa  77  0.0000000000002  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.260267  n/a   
 
 
-
 
NC_002950  PG1616  hypothetical protein  30.67 
 
 		 230 aa  76.6  0.0000000000003  Porphyromonas gingivalis W83  Bacteria  n/a    normal  1 
 
 
-
 
NC_007514  Cag_1935  succinate dehydrogenase, cytochrome b558 subunit  28.31 
 
 		 221 aa  76.3  0.0000000000003  Chlorobium chlorochromatii CaD3  Bacteria  normal  1  n/a   
 
 
-
 
NC_014230  CA2559_04700  Succinate dehydrogenase, cytochrome b558 subunit  27.54 
 
 		 239 aa  69.3  0.00000000004  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.142799  n/a   
 
 
-
 
NC_009441  Fjoh_0677  succinate dehydrogenase/fumarate reductase cytochrome b subunit  26.6 
 
 		 221 aa  64.7  0.000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.330554  n/a   
 
 
-
 
NC_013947  Snas_5226  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  24.12 
 
 		 232 aa  64.3  0.000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.659041  normal  1 
 
 
-
 
NC_013061  Phep_3265  succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family  25.35 
 
 		 224 aa  57  0.0000002  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0102296  normal  0.074852 
 
 
-
 
NC_007604  Synpcc7942_0314  succinate dehydrogenase subunit C  26.97 
 
 		 209 aa  46.2  0.0004  Synechococcus elongatus PCC 7942  Bacteria  normal  0.884437  normal  1 
 
 
-
 
NC_007516  Syncc9605_2086  succinate dehydrogenase subunit C  25.42 
 
 		 208 aa  42.7  0.004  Synechococcus sp. CC9605  Bacteria  normal  1  normal  1 
 
 
-
 
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