8 homologs were found in PanDaTox collection
for query gene GM21_2159 on replicon NC_012918
Organism: Geobacter sp. M21



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_2159  hypothetical protein  100 
 
 
130 aa  270  6e-72  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2057  hypothetical protein  93.85 
 
 
130 aa  234  3e-61  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1749  hypothetical protein  45.8 
 
 
170 aa  123  1e-27  Geobacter sulfurreducens PCA  Bacteria  decreased coverage  0.000415996  n/a   
 
 
-
 
NC_007517  Gmet_1836  hypothetical protein  41.32 
 
 
132 aa  110  8.000000000000001e-24  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000707106  normal 
 
 
-
 
NC_010814  Glov_1848  hypothetical protein  31.58 
 
 
130 aa  77.8  0.00000000000005  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2145  hypothetical protein  32.35 
 
 
119 aa  74.7  0.0000000000004  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0035988  n/a   
 
 
-
 
NC_008554  Sfum_0542  hypothetical protein  30 
 
 
143 aa  52.4  0.000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.561473  normal  0.543594 
 
 
-
 
NC_009943  Dole_1172  hypothetical protein  26.67 
 
 
123 aa  46.6  0.0001  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.958504  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>