8 homologs were found in PanDaTox collection
for query gene Gbem_2057 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_2057  hypothetical protein  100 
 
 
130 aa  268  2e-71  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2159  hypothetical protein  93.85 
 
 
130 aa  254  4e-67  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU1749  hypothetical protein  47.33 
 
 
170 aa  127  7.000000000000001e-29  Geobacter sulfurreducens PCA  Bacteria  decreased coverage  0.000415996  n/a   
 
 
-
 
NC_007517  Gmet_1836  hypothetical protein  42.15 
 
 
132 aa  110  6e-24  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000707106  normal 
 
 
-
 
NC_010814  Glov_1848  hypothetical protein  33.33 
 
 
130 aa  83.2  0.000000000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2145  hypothetical protein  33.33 
 
 
119 aa  75.5  0.0000000000002  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0035988  n/a   
 
 
-
 
NC_008554  Sfum_0542  hypothetical protein  29.17 
 
 
143 aa  53.9  0.0000007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.561473  normal  0.543594 
 
 
-
 
NC_009943  Dole_1172  hypothetical protein  26.67 
 
 
123 aa  47.4  0.00007  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.958504  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>