Gene Sfum_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0542 
Symbol 
ID4461193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp661376 
End bp661807 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content58% 
IMG OID639701298 
Producthypothetical protein 
Protein accessionYP_844676 
Protein GI116747989 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.561473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.543594 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGCA AGCGCGCACC CATTCCCGAG ATGCTGTTGG ACAACGGGCT GACACTCCAT 
TTCGAGGATC GTTCACGTCC GATCCCCGGA GGGCGCAGCC AGGTCGTTCT TTGCATATCC
ATTCCGTTTC GCGTCAGGGA ATTCGTTGCC GAGGATCCCG AAATCACGCC CGAGCAGGCG
GCACAAGTAC TCGGCGACAC GGTAACCTAC TCCGTGGAGA AGGTCCGTAA CTTCGTCCCG
CAGGAATCCG TCGAGCAAAA CCTCCAACAA ATGAGGGAGG AATTCATCCG CTCCAACCTG
GCCTACCTTC TCAATCCCTC ATTTCCAAGG CGGTTCCTGA TCAAGAAGGT CCGGGAAGCT
CTCGAGGCAC GCCGACTCGA AGAGGCACAT TCCAGGGCGC TCCACGATTC CGCTCCGGAA
CACGACGATT GA
 
Protein sequence
MDGKRAPIPE MLLDNGLTLH FEDRSRPIPG GRSQVVLCIS IPFRVREFVA EDPEITPEQA 
AQVLGDTVTY SVEKVRNFVP QESVEQNLQQ MREEFIRSNL AYLLNPSFPR RFLIKKVREA
LEARRLEEAH SRALHDSAPE HDD