6 homologs were found in PanDaTox collection
for query gene Dtox_3892 on replicon NC_013216
Organism: Desulfotomaculum acetoxidans DSM 771



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013216  Dtox_3892  putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily  100 
 
 		 129 aa  268  2e-71  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  0.112904 
 
 
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NC_013216  Dtox_1886  putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily  61.34 
 
 		 122 aa  159  9e-39  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.000680533  normal  0.206329 
 
 
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NC_010182  BcerKBAB4_5288  ECF subfamily RNA polymerase sigma-24 factor  32.95 
 
 		 118 aa  63.2  0.000000001  Bacillus weihenstephanensis KBAB4  Bacteria  n/a    n/a   
 
 
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NC_011899  Hore_07280  putative helix-turn-helix protein YlxM/p13 family protein  38.03 
 
 		 138 aa  46.2  0.0001  Halothermothrix orenii H 168  Bacteria  hitchhiker  4.44175e-17  n/a   
 
 
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NC_008148  Rxyl_1163  RNA polymerase, sigma 28 subunit  27.78 
 
 		 257 aa  42.7  0.002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
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NC_011830  Dhaf_3421  two component transcriptional regulator, LuxR family  28.75 
 
 		 204 aa  41.6  0.003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
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