Gene Dtox_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1886 
Symbol 
ID8428865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1996271 
End bp1996639 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content44% 
IMG OID645034221 
Productputative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily 
Protein accessionYP_003191355 
Protein GI258515133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000680533 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.206329 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGTG GCAAAATTGA CCTGCGAAGT AAAACGAAAA GGCTGGAGGA CGCTTACCCG 
GTAGACACGC CTAAAGGAGT ACATGCGTTA CTCTCGCAGA TTCATTATAT CCGCGAGGGC
CGCTTTACCA GGGGCGACTA TGATGCCAGC ATACTCCTGA TAGATTTTGA GCAATCAATG
GAAGAAGCAA GATTGACCGC AAGGCAAAGG CAGATTATCA AGATGGTGTT CGAATTAGAT
TTGTACCAGG ATGAAGCTGC AAATATTTTA GGTATTACCC AGCAAGCTAT CAGTGACCAT
GTTAAAACTT TAGTATGCAA GATTGCCAGA ATAAATAAAC AGAAGGAGGA ATTGTATGTA
TGCGGGTAG
 
Protein sequence
MGGGKIDLRS KTKRLEDAYP VDTPKGVHAL LSQIHYIREG RFTRGDYDAS ILLIDFEQSM 
EEARLTARQR QIIKMVFELD LYQDEAANIL GITQQAISDH VKTLVCKIAR INKQKEELYV
CG