7 homologs were found in PanDaTox collection
for query gene BcerKBAB4_5288 on replicon NC_010182
Organism: Bacillus weihenstephanensis KBAB4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010182  BcerKBAB4_5288  ECF subfamily RNA polymerase sigma-24 factor  100 
 
 
118 aa  243  8e-64  Bacillus weihenstephanensis KBAB4  Bacteria  n/a    n/a   
 
 
-
 
NC_013216  Dtox_1886  putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily  32.76 
 
 
122 aa  65.9  0.0000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.000680533  normal  0.206329 
 
 
-
 
NC_013216  Dtox_3892  putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily  32.95 
 
 
129 aa  63.2  0.000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.112904 
 
 
-
 
NC_013521  Sked_32800  RNA polymerase sigma factor, sigma-70 family  46.81 
 
 
212 aa  45.8  0.0002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.194133 
 
 
-
 
NC_013595  Sros_0096  RNA polymerase, sigma-24 subunit, ECF subfamily  40.43 
 
 
170 aa  42.4  0.002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011126  HY04AAS1_0984  RNA polymerase, sigma 28 subunit, FliA/WhiG  26.04 
 
 
245 aa  41.6  0.004  Hydrogenobaculum sp. Y04AAS1  Bacteria  unclonable  0.0000000000000619324  n/a   
 
 
-
 
NC_013947  Snas_4567  RNA polymerase sigma-24 subunit, ECF subfamily  40.98 
 
 
172 aa  40.4  0.009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.499473 
 
 
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