11 homologs were found in PanDaTox collection
for query gene Dole_1722 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_1722  radical SAM domain-containing protein  100 
 
 
350 aa  726    Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0575415  n/a   
 
 
-
 
NC_007498  Pcar_1124  Fe-S oxidoreductases  29.27 
 
 
338 aa  53.5  0.000006  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3345  radical SAM domain-containing protein  28.46 
 
 
338 aa  50.8  0.00003  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0740  hypothetical protein  21.48 
 
 
302 aa  50.4  0.00005  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1840  radical SAM domain-containing protein  20.54 
 
 
288 aa  49.7  0.00007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4105  hypothetical protein  24.5 
 
 
310 aa  46.2  0.0007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.922484  normal  0.477989 
 
 
-
 
NC_013131  Caci_1174  Radical SAM domain protein  24 
 
 
312 aa  45.4  0.001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.484081  normal 
 
 
-
 
NC_010322  PputGB1_1500  molybdenum cofactor synthesis domain-containing protein  28.57 
 
 
322 aa  44.7  0.003  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0301  radical SAM domain-containing protein  31.82 
 
 
481 aa  44.3  0.003  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010831  Cphamn1_0679  Radical SAM domain protein  23.53 
 
 
462 aa  42.7  0.009  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3237  radical SAM domain protein  21.61 
 
 
298 aa  42.7  0.01  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.00533932  normal  0.1595 
 
 
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