11 homologs were found in PanDaTox collection
for query gene Dde_3554 on replicon NC_007519
Organism: Desulfovibrio desulfuricans subsp. desulfuricans str. G20



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007519  Dde_3554  hypothetical protein  100 
 
 
98 aa  194  4.0000000000000005e-49  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.000000322896  n/a   
 
 
-
 
NC_007519  Dde_3760  hypothetical protein  48.42 
 
 
140 aa  92  2e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_01395  predicted DNA-binding transcriptional regulator  52.63 
 
 
145 aa  43.1  0.001  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2208  transcriptional regulator, XRE family  52.63 
 
 
145 aa  43.1  0.001  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1522  hypothetical protein  52.63 
 
 
145 aa  43.1  0.001  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_1617  DNA-binding protein  52.63 
 
 
145 aa  43.1  0.001  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2221  XRE family transcriptional regulator  52.63 
 
 
145 aa  43.1  0.001  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_1736  hypothetical protein  52.63 
 
 
145 aa  43.1  0.001  Escherichia coli SMS-3-5  Bacteria  normal  0.335135  hitchhiker  0.00000000000538292 
 
 
-
 
NC_011353  ECH74115_2043  hypothetical protein  52.63 
 
 
145 aa  43.1  0.001  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.00057688  hitchhiker  0.0000000000000165138 
 
 
-
 
NC_012892  B21_01406  hypothetical protein  52.63 
 
 
145 aa  43.1  0.001  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1008  hypothetical protein  32.1 
 
 
86 aa  41.6  0.004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.296536  normal 
 
 
-
 
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