| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1008 |
|---|
| Symbol | |
|---|
| ID | 5538474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 1317418 |
|---|
| End bp | 1317678 |
|---|
| Gene Length | 261 bp |
|---|
| Protein Length | 86 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640893151 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001431134 |
|---|
| Protein GI | 156741005 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1598] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.296536 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAG GCACGATCTA CAAATTGCCG CTGGTCTTTG AGCCGCAACC TGAAGGCGGA
TATACGGTCA CATGTCCAAT CCTTCCAGAG CTGATCACGG AAGGTGACAC GATCGCCGAA
GCGCTGGAGA ACGTCAAGGA CGCCTTGCTT GCCATTGTCG AAACCTGTCA GGATTTGCAG
CGTCCTTTAC CGGCCACCCT GCAACAAATC GCTCTCGATC GTTCAGTTCC TTTCTGGGTG
GAAACGGCGG TTGCGGTATG A
|
|---|
| Protein sequence | MAEGTIYKLP LVFEPQPEGG YTVTCPILPE LITEGDTIAE ALENVKDALL AIVETCQDLQ
RPLPATLQQI ALDRSVPFWV ETAVAV
|
|---|
| |