11 homologs were found in PanDaTox collection
for query gene Daro_1039 on replicon NC_007298
Organism: Dechloromonas aromatica RCB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007298  Daro_1039  hypothetical protein  100 
 
 
468 aa  957    Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_3699  hypothetical protein  29.27 
 
 
414 aa  107  4e-22  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1477  hypothetical protein  29.2 
 
 
344 aa  97.1  5e-19  Dehalococcoides ethenogenes 195  Bacteria  normal  0.192207  n/a   
 
 
-
 
NC_009455  DehaBAV1_1041  hypothetical protein  28.76 
 
 
386 aa  97.4  5e-19  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0084  hypothetical protein  28.07 
 
 
383 aa  93.2  9e-18  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3067  replication initiation factor  30.22 
 
 
390 aa  90.5  6e-17  Geobacter bemidjiensis Bem  Bacteria  normal  0.0900674  n/a   
 
 
-
 
NC_007517  Gmet_2276  replication initiation factor  31.31 
 
 
393 aa  89.4  1e-16  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.00843988  hitchhiker  0.00603168 
 
 
-
 
NC_009719  Plav_0100  hypothetical protein  26.67 
 
 
368 aa  81.3  0.00000000000004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.243385 
 
 
-
 
NC_014148  Plim_2650  replication initiation factor  25.61 
 
 
429 aa  69.3  0.0000000002  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.624324  n/a   
 
 
-
 
NC_008043  TM1040_3581  hypothetical protein  23.84 
 
 
382 aa  50.1  0.0001  Ruegeria sp. TM1040  Bacteria  normal  0.106267  normal  0.283892 
 
 
-
 
NC_009952  Dshi_0392  hypothetical protein  24.25 
 
 
382 aa  48.9  0.0002  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.375122 
 
 
-
 
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