| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3581 |
|---|
| Symbol | |
|---|
| ID | 4075509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008043 |
|---|
| Strand | - |
|---|
| Start bp | 631198 |
|---|
| End bp | 632346 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638005101 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_611812 |
|---|
| Protein GI | 99078554 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.106267 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.283892 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCGG ATATCCTGCA TTCGGGCTTT GATGGGCTTA AATTCACTGT CGAGACCGAT
ATCCCGCCCG AGCTGCGCAC GGCACTGGCT GAGGCCAAGG CGCAGGCAAT CCAGACCAAT
GCCGAGACCG TTATGGAATT TGGCTCTGTG GCTCTCTCAG TGCGCCGTAC AGGCGGTTCG
GCCTTTTCTG CCCATACTGG GGAGTATGGG GCCGAGTGGT ACTTTCTCGA CCCGGAAAAC
CGCCCTGCAA ACAATCCCGG CATTACCGTG GACTTTCGCG CCTTCCTTCT AGCAACTGGC
GGGCTGGACG CCGCAGAGAA ACACTTTCGC ACCTGCATGG ACGCCTTCGG CATTCGTTAT
GCCGATCATC TCTTGCGCGT GAGCCGTGTG GATTATGCCA TCGACTTTCT GGCCCCTTGG
TTTGAACCAG ACCGCGAGGC TCTGGTGGTG CCACCCGGCA CACGTGTTCA GGAACACACC
GGTATTGATG AAACAGAAAC CCATGCCACC GGTGCGCGCG TCACCGGCCT GCGCGCCGGA
GCCGTCGCCA ACCGGCAGTT GGTGATCTAC GACAAGCGAC AAGAGGTTAT GCAAAAGGGC
AAGCTGGGCT GGCTCACCAT CTGGAACGAC GCCCGCGCCC AGTTGAACCG TCCGCCCCTC
GACCTCACAG ACCGGATGAC CAGCCAAGTC TGGCGCTTTG AGCTGCGCAT GGGATCCAAG
CAACTGCGCA ACCGCTGGGA AATGCGGTCA TGGCAAGACC TACGCGATAT GGTCGGAGAC
GCCTACGCCG AGTTCTGCGA AAAGATCCGC TACACCTGCC CCACCACCGA CAGCAACCGC
GCCCGCTGGC CAACACATGA CCTTTGGCGC GAGGTCGCGA GCGTGATCGC GAATGACCTA
TATGAGAATT GCTCTGGCGT GTTGCCAAGC GAGGTGATCG AGACCAACCG GGCCGAACAC
ATGCGCATGC TGGACCGGCA AATCCTTGGC CTTCTGGTGT CCCGTGCAGC AGCGTCAGAG
GTTCAGCCGC ATGAGTTCGC GGAGTTTCTA GATACGCATA TAGAAGCGAT TGAACGGATG
TCGGAAGAAC ACGCAACACC ACTGGCGGAA CGGATTAGGA AGGCGACAGA GCGGTATCGA
TTCAAATAG
|
|---|
| Protein sequence | MEADILHSGF DGLKFTVETD IPPELRTALA EAKAQAIQTN AETVMEFGSV ALSVRRTGGS
AFSAHTGEYG AEWYFLDPEN RPANNPGITV DFRAFLLATG GLDAAEKHFR TCMDAFGIRY
ADHLLRVSRV DYAIDFLAPW FEPDREALVV PPGTRVQEHT GIDETETHAT GARVTGLRAG
AVANRQLVIY DKRQEVMQKG KLGWLTIWND ARAQLNRPPL DLTDRMTSQV WRFELRMGSK
QLRNRWEMRS WQDLRDMVGD AYAEFCEKIR YTCPTTDSNR ARWPTHDLWR EVASVIANDL
YENCSGVLPS EVIETNRAEH MRMLDRQILG LLVSRAAASE VQPHEFAEFL DTHIEAIERM
SEEHATPLAE RIRKATERYR FK
|
|---|
| |