6 homologs were found in PanDaTox collection
for query gene Cpin_5872 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_5872  hypothetical protein  100 
 
 
381 aa  790    Chitinophaga pinensis DSM 2588  Bacteria  normal  0.988118  normal 
 
 
-
 
NC_010571  Oter_3252  hypothetical protein  34.52 
 
 
388 aa  182  1e-44  Opitutus terrae PB90-1  Bacteria  normal  0.147487  normal  0.151129 
 
 
-
 
NC_008255  CHU_0885  a-glycosyltransferase  27.57 
 
 
384 aa  75.1  0.000000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.00174495  normal 
 
 
-
 
NC_009523  RoseRS_2179  glycosyl transferase, group 1  23.12 
 
 
388 aa  59.3  0.0000001  Roseiflexus sp. RS-1  Bacteria  normal  0.416488  normal 
 
 
-
 
NC_009767  Rcas_1288  glycosyl transferase group 1  23.78 
 
 
385 aa  52  0.00002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.376633 
 
 
-
 
NC_013501  Rmar_1139  hypothetical protein  25 
 
 
384 aa  51.6  0.00002  Rhodothermus marinus DSM 4252  Bacteria  normal  0.776672  n/a   
 
 
-
 
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