12 homologs were found in PanDaTox collection
for query gene Cpin_3988 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_3988  protein of unknown function DUF218  100 
 
 
433 aa  903    Chitinophaga pinensis DSM 2588  Bacteria  normal  0.672563  normal  0.593684 
 
 
-
 
NC_013730  Slin_6227  protein of unknown function DUF218  32.22 
 
 
420 aa  214  2.9999999999999995e-54  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1483  protein of unknown function DUF218  39.55 
 
 
368 aa  172  1e-41  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.228431 
 
 
-
 
NC_013037  Dfer_5793  protein of unknown function DUF218  30.52 
 
 
225 aa  56.2  0.000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_2090  hypothetical protein  36.46 
 
 
241 aa  50.8  0.00004  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_4400  hypothetical protein  30.77 
 
 
273 aa  47.8  0.0003  Trichodesmium erythraeum IMS101  Bacteria  normal  0.846693  normal  0.269801 
 
 
-
 
NC_013525  Tter_0376  protein of unknown function DUF218  28.93 
 
 
188 aa  45.4  0.002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011071  Smal_3832  protein of unknown function DUF218  32.2 
 
 
210 aa  43.1  0.009  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0441  protein of unknown function DUF218  30.63 
 
 
265 aa  43.1  0.009  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0454  protein of unknown function DUF218  30.63 
 
 
265 aa  43.1  0.009  Cyanothece sp. PCC 8802  Bacteria  normal  0.28276  normal  0.0360985 
 
 
-
 
NC_007413  Ava_0399  hypothetical protein  35.21 
 
 
263 aa  43.1  0.01  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.30478 
 
 
-
 
NC_014210  Ndas_0746  protein of unknown function DUF218  29.13 
 
 
370 aa  43.1  0.01  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.770006 
 
 
-
 
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