Gene Ava_0399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0399 
Symbol 
ID3682677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp515470 
End bp516261 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content42% 
IMG OID637715728 
Producthypothetical protein 
Protein accessionYP_320920 
Protein GI75906624 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.30478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTAT ATTTATCTAA ATTACTGCCT TTATTTTTTT ATCCTTTGGG ATTAGCTAGT 
GTCAGTTTAG TAGTAGCACT AGTAACTTTA CGGAAACGTC CACGTATAGC GACTACAGCC
ATAGCTTTAT CGTTAACTTT ATTGCTATTG TGCAGTAACG CCTGGGTTGC TAAATACTTG
GTGCGATCGC TAGAATGGCA AAATCTACCT CCCGCACAAT TACCCAACGC TGAAGCCATT
ATCGTCTTAG GTGGTGCGAC TAAATCAGTC TTTCCCCCAA GGATTACACC AGATTTAAGT
GAACAAGGCG ATCGCGTCAT CTATGCCGCC CAATTATATC GCCAAAACAA AGCCCCACTC
ATCATCCTCA GTGGGGGACG CATCGATTGG CGCGGAAGTG GTTCATCGGA ATCAACAGAT
ATGGCAAATA TCCTCACCTC TCTAGGTATC CCGGCTAGTG TGTTGATTGA AGAACCCGAT
TCACTCAATA CTTATCAAAA TGCCGTAAAT GTCAAGAAAA TATTAGCATC TCGTGGTATT
GATAAAGTAT TGTTGGTAAC TTCAGCATTA CATATGCCGC GATCGCTGAA AATTTTCCAA
CGTCAAGGTA TGAACGTTAT CCCCGCACCC ACTGACTTTT TAGTTAGCGC AGGTGAACTC
CAAGAACTCG GCAACACCCC CAAAGCCGCT ATATTGAATT TACTACCAGA TACTTACAAC
TTACACCTAT TCACAAACGC CCTAAAAGAA TATGTTGGTA GCTTTATTTA TTGGTTAAGA
GGTTGGGTGT AA
 
Protein sequence
MFLYLSKLLP LFFYPLGLAS VSLVVALVTL RKRPRIATTA IALSLTLLLL CSNAWVAKYL 
VRSLEWQNLP PAQLPNAEAI IVLGGATKSV FPPRITPDLS EQGDRVIYAA QLYRQNKAPL
IILSGGRIDW RGSGSSESTD MANILTSLGI PASVLIEEPD SLNTYQNAVN VKKILASRGI
DKVLLVTSAL HMPRSLKIFQ RQGMNVIPAP TDFLVSAGEL QELGNTPKAA ILNLLPDTYN
LHLFTNALKE YVGSFIYWLR GWV