13 homologs were found in PanDaTox collection
for query gene Cphy_2542 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_2542  peptidoglycan-binding LysM  100 
 
 
116 aa  236  8e-62  Clostridium phytofermentans ISDg  Bacteria  normal  0.0261672  n/a   
 
 
-
 
NC_011772  BCG9842_B3803  lysM domain protein  29.75 
 
 
159 aa  44.7  0.0005  Bacillus cereus G9842  Bacteria  unclonable  0.000000000302093  hitchhiker  1.81276e-16 
 
 
-
 
NC_011899  Hore_11460  Peptidoglycan-binding LysM  36.9 
 
 
120 aa  43.1  0.001  Halothermothrix orenii H 168  Bacteria  decreased coverage  4.10627e-17  n/a   
 
 
-
 
NC_013411  GYMC61_2119  cell division suppressor protein YneA  26.32 
 
 
101 aa  42.7  0.002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A1542  lysM domain protein  28.93 
 
 
159 aa  41.6  0.003  Bacillus cereus B4264  Bacteria  hitchhiker  0.001251  n/a   
 
 
-
 
NC_011899  Hore_06410  cell wall hydrolase SleB  44 
 
 
546 aa  41.6  0.003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_2223  Peptidoglycan-binding lysin domain protein  27.88 
 
 
203 aa  42  0.003  Gordonia bronchialis DSM 43247  Bacteria  normal  0.41911  n/a   
 
 
-
 
NC_003909  BCE_1612  lysM domain-containing protein  28.93 
 
 
159 aa  41.2  0.005  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.0000000378837  n/a   
 
 
-
 
NC_005957  BT9727_1369  peptidoglycan-binding protein  29.17 
 
 
162 aa  41.2  0.005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  5.6403400000000004e-18  n/a   
 
 
-
 
NC_006274  BCZK1368  peptidoglycan-binding protein  28.93 
 
 
159 aa  41.2  0.005  Bacillus cereus E33L  Bacteria  hitchhiker  0.000000000189168  n/a   
 
 
-
 
NC_011658  BCAH187_A1648  lysM domain protein  28.93 
 
 
159 aa  41.2  0.005  Bacillus cereus AH187  Bacteria  unclonable  0.000000000383151  n/a   
 
 
-
 
NC_011773  BCAH820_1581  lysM domain protein  29.17 
 
 
159 aa  40.8  0.006  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  2.05729e-36 
 
 
-
 
NC_010184  BcerKBAB4_1409  peptidoglycan-binding LysM  30.77 
 
 
159 aa  40.8  0.007  Bacillus weihenstephanensis KBAB4  Bacteria  unclonable  0.0000000791474  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>