Gene Hore_11460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_11460 
Symbol 
ID7312891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1238598 
End bp1238960 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content28% 
IMG OID643611584 
ProductPeptidoglycan-binding LysM 
Protein accessionYP_002508893 
Protein GI220931985 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.10627e-17 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTGTA CATCTGTTTT TAATAGATTC ACAAAGGAGG GGATATTAAT GTATCAACTG 
GTTATAAAAA ATAGTTATCA CAGAAAAAAA CCAGGAGTCA CGAAAAAGGT TTTAAACTAC
ATAATAACTT TTTTATTATG TGTTGTTATA ATAACTGTTT TTGCCTACAA AACCCTTGGA
AATAATAAAG TAGAATTTAA AAAAATCACT GTAAAATCAG GACAAACTCT CTGGAGTATC
GCAAATAAAT ATAATAGTTA TAACGAAGAC CCCCGAAAAA TGGTCTATAA AATAAAACAA
ATCAATAACC TTGATAAATC CATTATACAG CCTGGACAAC AAATATTAAT TCCAGTTAAT
TGA
 
Protein sequence
MYCTSVFNRF TKEGILMYQL VIKNSYHRKK PGVTKKVLNY IITFLLCVVI ITVFAYKTLG 
NNKVEFKKIT VKSGQTLWSI ANKYNSYNED PRKMVYKIKQ INNLDKSIIQ PGQQILIPVN