Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_11460 |
Symbol | |
ID | 7312891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1238598 |
End bp | 1238960 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 643611584 |
Product | Peptidoglycan-binding LysM |
Protein accession | YP_002508893 |
Protein GI | 220931985 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 4.10627e-17 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTGTA CATCTGTTTT TAATAGATTC ACAAAGGAGG GGATATTAAT GTATCAACTG GTTATAAAAA ATAGTTATCA CAGAAAAAAA CCAGGAGTCA CGAAAAAGGT TTTAAACTAC ATAATAACTT TTTTATTATG TGTTGTTATA ATAACTGTTT TTGCCTACAA AACCCTTGGA AATAATAAAG TAGAATTTAA AAAAATCACT GTAAAATCAG GACAAACTCT CTGGAGTATC GCAAATAAAT ATAATAGTTA TAACGAAGAC CCCCGAAAAA TGGTCTATAA AATAAAACAA ATCAATAACC TTGATAAATC CATTATACAG CCTGGACAAC AAATATTAAT TCCAGTTAAT TGA
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Protein sequence | MYCTSVFNRF TKEGILMYQL VIKNSYHRKK PGVTKKVLNY IITFLLCVVI ITVFAYKTLG NNKVEFKKIT VKSGQTLWSI ANKYNSYNED PRKMVYKIKQ INNLDKSIIQ PGQQILIPVN
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