8 homologs were found in PanDaTox collection
for query gene Caul_4269 on replicon NC_010338
Organism: Caulobacter sp. K31



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010338  Caul_4269  putative transmembrane anti-sigma factor  100 
 
 
275 aa  530  1e-149  Caulobacter sp. K31  Bacteria  normal  normal  0.902774 
 
 
-
 
NC_010717  PXO_00667  hypothetical protein  35.47 
 
 
247 aa  119  4.9999999999999996e-26  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3837  putative transmembrane anti-sigma factor  34.08 
 
 
233 aa  87.8  2e-16  Sphingomonas wittichii RW1  Bacteria  normal  0.173099  normal  0.0857204 
 
 
-
 
NC_007794  Saro_1591  putative transmembrane transcriptional regulator (anti-sigma factor)  29.55 
 
 
229 aa  68.6  0.0000000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5142  putative transmembrane anti-sigma factor  32.14 
 
 
260 aa  68.2  0.0000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.562038  normal 
 
 
-
 
NC_008048  Sala_2956  putative transmembrane anti-sigma factor  33.03 
 
 
235 aa  66.6  0.0000000004  Sphingopyxis alaskensis RB2256  Bacteria  hitchhiker  0.00524194  normal  0.11263 
 
 
-
 
NC_007954  Sden_0569  hypothetical protein  23.99 
 
 
249 aa  52.8  0.000006  Shewanella denitrificans OS217  Bacteria  normal  0.761464  n/a   
 
 
-
 
NC_012850  Rleg_0433  putative transmembrane anti-sigma factor  31.82 
 
 
267 aa  43.9  0.003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.799766 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>