Gene Sden_0569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0569 
Symbol 
ID4016542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp644139 
End bp644888 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content50% 
IMG OID637954554 
Producthypothetical protein 
Protein accessionYP_561582 
Protein GI91791931 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.761464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA CTGACGAAAC CTTATCCGCC TTTATCGATG CTCAGCTGCC AGAAGCGCAG 
ATGGAGCAGG TTAGGGAGGC CATTGCCTTA GATGAAACCC TCGCCGAGCG CCTCGCCGAT 
TTGGCCATGG TCGACCCTAT GGTGAAGGCT TATTATCAGG ATATCGACCA GCACCCAGTG 
CCTGAAGCCA CCTTAAGATT GCTGGAGGAG GATGTGGCGC CCACGGCTAA GATCATCGCC 
TTTCCAAGTT GGCGAAAACT GCAACAACAG GTACAACAAC ATGCAGCGGC ATGGGTGTTT 
ATTGCCTTGT TAGCAGGCTA TGGGGTGTCG CAATTTGACA TCATCAGTGG CACTGCCCCA 
GAGCCATCCT CAACCTTTGC CAGCCAAACC TCGTCGTTTG ATCTTAACTT AGGTGAGCAA 
TTAGAAAGTC AAATGAGCGG CCAAAGGATC GCCCTTACCG ACAATCAAGC TTTATCGATA 
AGGTTAAGTT TTTACAATCA AGAGGGTGAC TTGTGCCGTC AGTATGGTTT AGAAAGCGAC 
AGCCAAATGA GCGAAAATAT TAGCTGCAGG CAACAAGGTG AGTGGCAGCA GGTGGCCAGT 
GTCAGTTTGC CCAAGGATAA GACTGGAGAT GCCCAATATC AGACCGCAAG TGGCGGCTCG 
GCGCTCGACT CAGTGTTAGA TAGTATGATG AAAGGATCTG GGCTTACCTT AGTGCAGGAA 
CAACAGGCAC TGGCAAGTTT ACAAGATTGA
 
Protein sequence
MKITDETLSA FIDAQLPEAQ MEQVREAIAL DETLAERLAD LAMVDPMVKA YYQDIDQHPV 
PEATLRLLEE DVAPTAKIIA FPSWRKLQQQ VQQHAAAWVF IALLAGYGVS QFDIISGTAP 
EPSSTFASQT SSFDLNLGEQ LESQMSGQRI ALTDNQALSI RLSFYNQEGD LCRQYGLESD 
SQMSENISCR QQGEWQQVAS VSLPKDKTGD AQYQTASGGS ALDSVLDSMM KGSGLTLVQE 
QQALASLQD