26 homologs were found in PanDaTox collection
for query gene BBta_6587 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_6587  putative Mu-like prophage DNA circulation protein  100 
 
 
422 aa  837    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3737  DNA circulation-like  30.6 
 
 
415 aa  120  3.9999999999999996e-26  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3051  putative bacteriophage DNA circulation protein, Mu-like  23.67 
 
 
475 aa  89.4  1e-16  Burkholderia xenovorans LB400  Bacteria  normal  0.273853  hitchhiker  0.000025391 
 
 
-
 
NC_002947  PP_3864  phage FluMu DNA circulation protein, putative  37.93 
 
 
420 aa  88.6  2e-16  Pseudomonas putida KT2440  Bacteria  normal  normal  0.891467 
 
 
-
 
NC_007492  Pfl01_1158  DNA circulation-like  38.26 
 
 
411 aa  84.7  0.000000000000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2449  putative Mu-like prophage DNA circulation protein  32.7 
 
 
159 aa  83.6  0.000000000000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2255  tail/DNA circulation protein  25.96 
 
 
446 aa  82  0.00000000000002  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.000334711 
 
 
-
 
NC_011094  SeSA_A4477  tail/DNA circulation protein  30.61 
 
 
446 aa  81.6  0.00000000000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  hitchhiker  0.00305287 
 
 
-
 
NC_011094  SeSA_A2252  tail/DNA circulation protein  30.61 
 
 
446 aa  81.6  0.00000000000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.257831 
 
 
-
 
NC_010465  YPK_3117  DNA circulation family protein  27.41 
 
 
468 aa  77.4  0.0000000000005  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4591  DNA circulation, N-terminal  34.21 
 
 
470 aa  77  0.0000000000006  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.422243  normal 
 
 
-
 
NC_009436  Ent638_2588  DNA circulation family protein  36.07 
 
 
438 aa  74.3  0.000000000004  Enterobacter sp. 638  Bacteria  normal  normal  0.0328137 
 
 
-
 
NC_011769  DvMF_0744  DNA circulation family protein  36.44 
 
 
446 aa  72  0.00000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_004578  PSPTO_0581  DNA circulation protein, putative  37.36 
 
 
607 aa  68.2  0.0000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.519076  n/a   
 
 
-
 
NC_011894  Mnod_2448  putative Mu-like prophage DNA circulation protein  37.61 
 
 
246 aa  63.5  0.000000007  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4486  Mu-like prophage DNA circulation protein-like protein  30.17 
 
 
428 aa  57.8  0.0000003  Xanthobacter autotrophicus Py2  Bacteria  normal  0.126188  normal  0.0913206 
 
 
-
 
NC_009436  Ent638_1654  DNA circulation family protein  38.96 
 
 
153 aa  54.7  0.000003  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_2815  DNA circulation family protein  32.65 
 
 
468 aa  53.5  0.000007  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1469  putative DNA circulation protein  32.65 
 
 
468 aa  53.5  0.000007  Yersinia pestis Angola  Bacteria  normal  normal  0.539442 
 
 
-
 
NC_009708  YpsIP31758_2737  putative DNA circulation protein  32.65 
 
 
468 aa  53.5  0.000007  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0189  DNA circulation family protein  26.36 
 
 
439 aa  52  0.00002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2088  hypothetical protein  27.62 
 
 
128 aa  47.8  0.0004  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0745  DNA circulation protein  26.23 
 
 
439 aa  47.4  0.0005  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0692  DNA circulation protein  26.23 
 
 
439 aa  47.4  0.0005  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_1874  DNA circulation family protein  30.77 
 
 
490 aa  47.4  0.0006  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.0000000000818097 
 
 
-
 
NC_004347  SO_2698  prophage MuSo2, DNA circulation protein, putative  33.75 
 
 
438 aa  46.2  0.001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
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