6 homologs were found in PanDaTox collection
for query gene Avi_9904 on replicon NC_011986
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011986  Avi_9904  hypothetical protein  100 
 
 
111 aa  231  3e-60  Agrobacterium vitis S4  Bacteria  n/a    n/a   
 
 
-
 
NC_009669  Oant_4541  hypothetical protein  56.88 
 
 
113 aa  139  9.999999999999999e-33  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009622  Smed_6445  hypothetical protein  58.72 
 
 
94 aa  136  1e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.463393 
 
 
-
 
NC_009622  Smed_6480  hypothetical protein  74.24 
 
 
111 aa  115  1.9999999999999998e-25  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.750014 
 
 
-
 
NC_012791  Vapar_2080  protein of unknown function DUF736  27.85 
 
 
102 aa  41.2  0.004  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3915  hypothetical protein  33.33 
 
 
107 aa  41.2  0.005  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
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