Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2080 |
Symbol | |
ID | 7972482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2226211 |
End bp | 2226519 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644792671 |
Product | protein of unknown function DUF736 |
Protein accession | YP_002943985 |
Protein GI | 239815075 |
COG category | [S] Function unknown |
COG ID | [COG5489] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAACA TCGGCACCTT CACCGCACAG AACAACGGCT TCACCGGCAC GGTTCGCACC CTGACGCTCA ACGTCAAGGT CAAGATCGCG CCCAGCGACA AGGAAAGCGA GAACGCCCCG GACTACCGCA TCGTGGCGGG CACCGGCTAC GAGATCGGCG CGGCCTGGAA GAAAGTCAGC AAGGCGGACC GGCCCTACCT GTCGGTAACG CTGGACGATC CGTCGTTCCC GGCGACCATC TATGCCCGCC TGGTCGAAGG CGACGACGGC GCGCACAACC TGATCTGGTC GCGCAGCAAG GGCGACTGA
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Protein sequence | MANIGTFTAQ NNGFTGTVRT LTLNVKVKIA PSDKESENAP DYRIVAGTGY EIGAAWKKVS KADRPYLSVT LDDPSFPATI YARLVEGDDG AHNLIWSRSK GD
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