7 homologs were found in PanDaTox collection
for query gene Amir_3792 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_3792  hypothetical protein  100 
 
 
335 aa  655    Actinosynnema mirum DSM 43827  Bacteria  normal  0.460925  n/a   
 
 
-
 
NC_013235  Namu_0146  serine/threonine protein kinase  50.17 
 
 
337 aa  238  1e-61  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8963  hypothetical protein  41.89 
 
 
318 aa  149  5e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0835  hypothetical protein  39.11 
 
 
364 aa  145  1e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.788787  normal  0.0618655 
 
 
-
 
NC_009371  OSTLU_42173  predicted protein  31.76 
 
 
154 aa  48.5  0.0001  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.543401  normal  0.310743 
 
 
-
 
NC_011988  Avi_6039  serine/threonine protein kinase  31.25 
 
 
301 aa  45.4  0.001  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5416  serine/threonine protein kinase, putative  31.3 
 
 
331 aa  43.5  0.006  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
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