11 homologs were found in PanDaTox collection
for query gene Amir_1837 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013093  Amir_1837  helix-turn-helix domain protein  100 
 
 		 290 aa  579  1e-164  Actinosynnema mirum DSM 43827  Bacteria  normal  0.483943  n/a   
 
 
-
 
NC_013093  Amir_3646  helix-turn-helix domain protein  36.6 
 
 		 301 aa  99.4  7e-20  Actinosynnema mirum DSM 43827  Bacteria  normal  0.858405  n/a   
 
 
-
 
NC_013093  Amir_2091  hypothetical protein  29.34 
 
 		 253 aa  87.8  2e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_1294  helix-turn-helix domain protein  25.95 
 
 		 290 aa  54.7  0.000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_6363  hypothetical protein  23.64 
 
 		 283 aa  48.1  0.0001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0272477  normal  1 
 
 
-
 
NC_013510  Tcur_0418  transcriptional regulator, XRE family  31.09 
 
 		 293 aa  47.8  0.0002  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_36660  predicted transcriptional regulator with C-terminal CBS domains  32.5 
 
 		 293 aa  44.7  0.002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0372485  normal  0.380414 
 
 
-
 
NC_013131  Caci_0020  transcriptional regulator, XRE family  25.89 
 
 		 291 aa  44.3  0.003  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_1005  transcriptional regulator, XRE family  43.94 
 
 		 309 aa  43.9  0.003  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_3446  XRE family transcriptional regulator  24.9 
 
 		 288 aa  43.5  0.004  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_4270  helix-turn-helix domain protein  43.1 
 
 		 290 aa  43.1  0.005  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
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