8 homologs were found in PanDaTox collection
for query gene Ajs_3477 on replicon NC_008782
Organism: Acidovorax sp. JS42



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008782  Ajs_3477  C4-dicarboxylate transporter/malic acid transport protein  100 
 
 
56 aa  109  1.0000000000000001e-23  Acidovorax sp. JS42  Bacteria  normal  0.0482318  normal  0.24926 
 
 
-
 
NC_011992  Dtpsy_2801  C4-dicarboxylate transporter/malic acid transport protein  98.21 
 
 
356 aa  109  2.0000000000000002e-23  Acidovorax ebreus TPSY  Bacteria  normal  0.518701  n/a   
 
 
-
 
NC_007406  Nwi_0780  C4-dicarboxylate transporter/malic acid transport protein  49.06 
 
 
357 aa  52.4  0.000002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.439513  normal 
 
 
-
 
NC_007964  Nham_3443  C4-dicarboxylate transporter/malic acid transport protein  45.28 
 
 
357 aa  50.1  0.00001  Nitrobacter hamburgensis X14  Bacteria  normal  0.288016  n/a   
 
 
-
 
NC_013730  Slin_0133  C4-dicarboxylate transporter/malic acid transport protein  42.31 
 
 
351 aa  47.8  0.00005  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_0077  C4-dicarboxylate transporter/malic acid transport protein  43.4 
 
 
360 aa  47.4  0.00007  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_1525  C4-dicarboxylate transporter/malic acid transport protein  44.44 
 
 
362 aa  45.8  0.0002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0288585  normal  0.364123 
 
 
-
 
NC_011761  AFE_1847  C4-dicarboxylate transporter/malic acid transport protein, putative  44.44 
 
 
362 aa  45.8  0.0002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
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