4 homologs were found in PanDaTox collection
for query gene AFE_1171 on replicon NC_011761
Organism: Acidithiobacillus ferrooxidans ATCC 23270



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011761  AFE_1171  tRNA-Met  100 
 
 
75 bp  149  1.0000000000000001e-34  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_R0015  tRNA-Met  93.94 
 
 
75 bp  50.1  0.00007  Dehalococcoides sp. BAV1  Bacteria  unclonable  0.000000000125426  n/a   
 
 
-
 
NC_013552  DhcVS_641  tRNA-Met  93.94 
 
 
75 bp  50.1  0.00007  Dehalococcoides sp. VS  Bacteria  decreased coverage  0.0000000000000945354  n/a   
 
 
-
 
NC_011126  HY04AAS1_R0050  tRNA-Met  93.75 
 
 
72 bp  48.1  0.0003  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000143302  n/a   
 
 
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