6 homologs were found in PanDaTox collection
for query gene TM1040_3820 on replicon NC_008042
Organism: Ruegeria sp. TM1040



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008042  TM1040_3820  type IV secretory pathway, VirB3-like  100 
 
 		 81 aa  166  1e-40  Ruegeria sp. TM1040  Bacteria  normal  0.300234  normal  0.0295906 
 
 
-
 
NC_009955  Dshi_3640  type IV secretory pathway VirB3 family protein  93.83 
 
 		 92 aa  159  1e-38  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.154816 
 
 
-
 
NC_009957  Dshi_3975  type IV secretory pathway VirB3 family protein  93.83 
 
 		 92 aa  159  2e-38  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  n/a   
 
 
-
 
NC_009622  Smed_6406  type IV secretory pathway VirB3 family protein  30 
 
 		 99 aa  44.3  0.0006  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
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NC_009669  Oant_4563  type IV secretory pathway VirB3 family protein  30 
 
 		 99 aa  41.2  0.005  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.185995  n/a   
 
 
-
 
NC_002978  WD0859  type IV secretion system protein VirB3  27.85 
 
 		 98 aa  40.4  0.009  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  1  n/a   
 
 
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