Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3975 |
Symbol | |
ID | 5714504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009957 |
Strand | + |
Start bp | 34432 |
End bp | 34710 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641276888 |
Product | type IV secretory pathway VirB3 family protein |
Protein accession | YP_001542184 |
Protein GI | 159046514 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3702] Type IV secretory pathway, VirB3 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTGAGC GCGCGCCTCT CTTTCTGGGC CTCGTGCGCC CTCCGAAGCT TCTGGGCCTG CCCATCATGT ACGCGATGGT CTGGCTTTTC GGCTCGGTGC TCTTGTTCGT CTGGGTCCAG CACATTGCGG TGCTGGGCGT AGCCGCCCTG CTCTACCCGG TTCTCTGGAA GGCCGCGGAC TGGGATCCGC GTTTCATCGA CGTGATGATG ACGGCGCTGC AAGAGACGCC GCCCACGCGG AACCGCTCCA TCCACGGCGG GGACAGCTAT GCCCCGTGA
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Protein sequence | MAERAPLFLG LVRPPKLLGL PIMYAMVWLF GSVLLFVWVQ HIAVLGVAAL LYPVLWKAAD WDPRFIDVMM TALQETPPTR NRSIHGGDSY AP
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