| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3820 |
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| Symbol | |
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| ID | 4074971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008042 |
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| Strand | - |
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| Start bp | 70579 |
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| End bp | 70824 |
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| Gene Length | 246 bp |
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| Protein Length | 81 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638004479 |
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| Product | type IV secretory pathway, VirB3-like |
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| Protein accession | YP_611214 |
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| Protein GI | 99077955 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3702] Type IV secretory pathway, VirB3 components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 0.300234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0295906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCGCCCGC CCAAGCTTTT GGGCTTGCCC ATCATGTACG CGATGGTCTG GCTCTTCGGC
TCAGTGCTTC TCTTCGTCTG GATCCAACAC ATCGTGGTGT TGGGCGTAAC CGCCTTTCTC
TATCCAGTGC TCTGGAAAGC CGCCGACTGG GATCCGCGTT TCATCGACGT GATGATGACC
GCGCTGCAGG AGACGCCCCC CACGCGAAAC CGCTCCATCC ATGGCGGGGA CAGCTATGCC
CCGTGA
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| Protein sequence | MRPPKLLGLP IMYAMVWLFG SVLLFVWIQH IVVLGVTAFL YPVLWKAADW DPRFIDVMMT
ALQETPPTRN RSIHGGDSYA P
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