4 homologs were found in PanDaTox collection
for query gene Shewana3_4219 on replicon NC_008573
Organism: Shewanella sp. ANA-3



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008573  Shewana3_4219  hypothetical protein  100 
 
 
242 aa  499  1e-140  Shewanella sp. ANA-3  Bacteria  normal  0.650672  normal  0.513979 
 
 
-
 
NC_009140  SNSL254_pSN254_0077  type IV conjugative transfer system protein TraV  26.7 
 
 
192 aa  57.4  0.0000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_008826  Mpe_B0369  sex pilus assembly protein  25.28 
 
 
230 aa  50.1  0.00003  Methylibium petroleiphilum PM1  Bacteria  normal  0.122124  normal 
 
 
-
 
NC_008765  Ajs_4179  membrane lipoprotein lipid attachment site  43.24 
 
 
216 aa  46.6  0.0003  Acidovorax sp. JS42  Bacteria  normal  0.51948  hitchhiker  0.00159684 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>