| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4179 |
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| Symbol | |
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| ID | 4670350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008765 |
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| Strand | - |
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| Start bp | 16270 |
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| End bp | 16920 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639826853 |
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| Product | membrane lipoprotein lipid attachment site |
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| Protein accession | YP_974015 |
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| Protein GI | 121582483 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02747] type IV conjugative transfer system lipoprotein TraV |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.51948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00159684 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGGCAC TGGCCTTGAC CTTTGGCATC GGGGCCGTGG TGGCCCTATC CGGTTGCAGC
AGCATGTCTG GCTTTGATGC GAAATCCGAA TTCGCGTGCA AGGCCCCGGA CGGCATCTTG
TGCGAGTCGA TGAGCGGCAT CTACGCCAAT GCCCAGGCGA AGAACCTGCC GGGCCAGCGC
GTGAATGCGC GCGGCGAGGC TCCGGTGGAA CTTTCGCAGG CGAAAGCCGG CAGCAACGTG
ATGACCAAGC CCATCTACTC GGGCACGCCG ATCCGCAGCG CACCGCGCCT GCTTCGCGTC
TGGTTCGCCC CGTGGGAAGA CACCGATGGC GATCTGCACG ACCAGTCCTA CGTGTACCTG
CCGGTCGATT CCGGCCGCTG GCTGATCGAG CACAACCGCC GCCGCATCCA GGACAACTAC
CGGCCGGTAC GCGCCCCGTC GAATGTGACG GCCCAGGCTG CGCAGCCGCA AACGGCCGGC
GCTGGCCAGC AACGGCAAAG CCCTGGCGTG CTGGGGCAGC AGCCAACGCC TCCCGCTGAC
AACGGGATGG AGTCTATCGG CATCCGTCAA GACCGCATGA GCAACGAGCA AGCCACCGAG
CTGCTGAACG GAATCATGCG CCCCGGCAAC GTCATCCCGG ACAGCGAATA A
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| Protein sequence | MKALALTFGI GAVVALSGCS SMSGFDAKSE FACKAPDGIL CESMSGIYAN AQAKNLPGQR
VNARGEAPVE LSQAKAGSNV MTKPIYSGTP IRSAPRLLRV WFAPWEDTDG DLHDQSYVYL
PVDSGRWLIE HNRRRIQDNY RPVRAPSNVT AQAAQPQTAG AGQQRQSPGV LGQQPTPPAD
NGMESIGIRQ DRMSNEQATE LLNGIMRPGN VIPDSE
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