6 homologs were found in PanDaTox collection
for query gene Pnap_2741 on replicon NC_008781
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008781  Pnap_2741  hypothetical protein  100 
 
 
156 aa  320  4e-87  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.546085  normal  0.0263375 
 
 
-
 
NC_012791  Vapar_4894  hypothetical protein  52.2 
 
 
155 aa  162  2.0000000000000002e-39  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2530  hypothetical protein  40.11 
 
 
182 aa  121  3e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00527013 
 
 
-
 
NC_009675  Anae109_0879  hypothetical protein  28.08 
 
 
145 aa  48.9  0.00002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.624118  normal  0.16145 
 
 
-
 
NC_010506  Swoo_0282  protein of unknown function Spy-related  30.47 
 
 
154 aa  47.8  0.00006  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.0000000126692  unclonable  0.0000000242912 
 
 
-
 
NC_009831  Ssed_0280  protein of unknown function, Spy-related  28.71 
 
 
168 aa  41.6  0.004  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.00000525037  unclonable  0.0000000000829203 
 
 
-
 
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