Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2530 |
Symbol | |
ID | 6163985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2760101 |
End bp | 2760649 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641665300 |
Product | hypothetical protein |
Protein accession | YP_001791560 |
Protein GI | 171059211 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.00527013 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAACCC TGATCAAACG CAGTCTGTTC GCCCTGATGG GCGTGGGCAT GGCCATCAGC TTGGCCGCTT GCGGACACGG CCCGATGGGC GGTGGCGACC CGATGGGCGG CGCCGGCGAG ATGATGGGCA TGCACGGCGG CGGCGGCCAT CACCGTGGCC CGATGAACGA GGCCGATGCC GCCAAGCGGC AGGAGCGCAT GCTCGAGCGC GCCACCAAGG AGCTGTCGCT CGACGACGCG CAGAAGCAGC GCCTGGCCAC GCTGATGAGC CAGATGCATG CGCAGCGCAA GGCCATGATG GGCGAGCCGG GCAAGGGCCC GCGCGAAGAC ATGCAGGCGC TGATTGCCGG TGAACGCTTC GATCGCAGCA AGGCGCAGGC GCTGGTCGAT GCCAAGACCG GCGCGGTCAA GGCCGCCAGC CCGCAGCTGA TCGCCGCGGC GGGCGATTTC TTCGACAGCC TCAAGCCCGA GCAGCAGGCC AAGGTGCGCG AGTTCATGGC CAAGCGTGGC GGCGGTCGCC ACCAAGGCAT GGGCCGCCAT CGCGACTGA
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Protein sequence | MQTLIKRSLF ALMGVGMAIS LAACGHGPMG GGDPMGGAGE MMGMHGGGGH HRGPMNEADA AKRQERMLER ATKELSLDDA QKQRLATLMS QMHAQRKAMM GEPGKGPRED MQALIAGERF DRSKAQALVD AKTGAVKAAS PQLIAAAGDF FDSLKPEQQA KVREFMAKRG GGRHQGMGRH RD
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