Gene Lcho_2530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2530 
Symbol 
ID6163985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2760101 
End bp2760649 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content69% 
IMG OID641665300 
Producthypothetical protein 
Protein accessionYP_001791560 
Protein GI171059211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00527013 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAACCC TGATCAAACG CAGTCTGTTC GCCCTGATGG GCGTGGGCAT GGCCATCAGC 
TTGGCCGCTT GCGGACACGG CCCGATGGGC GGTGGCGACC CGATGGGCGG CGCCGGCGAG
ATGATGGGCA TGCACGGCGG CGGCGGCCAT CACCGTGGCC CGATGAACGA GGCCGATGCC
GCCAAGCGGC AGGAGCGCAT GCTCGAGCGC GCCACCAAGG AGCTGTCGCT CGACGACGCG
CAGAAGCAGC GCCTGGCCAC GCTGATGAGC CAGATGCATG CGCAGCGCAA GGCCATGATG
GGCGAGCCGG GCAAGGGCCC GCGCGAAGAC ATGCAGGCGC TGATTGCCGG TGAACGCTTC
GATCGCAGCA AGGCGCAGGC GCTGGTCGAT GCCAAGACCG GCGCGGTCAA GGCCGCCAGC
CCGCAGCTGA TCGCCGCGGC GGGCGATTTC TTCGACAGCC TCAAGCCCGA GCAGCAGGCC
AAGGTGCGCG AGTTCATGGC CAAGCGTGGC GGCGGTCGCC ACCAAGGCAT GGGCCGCCAT
CGCGACTGA
 
Protein sequence
MQTLIKRSLF ALMGVGMAIS LAACGHGPMG GGDPMGGAGE MMGMHGGGGH HRGPMNEADA 
AKRQERMLER ATKELSLDDA QKQRLATLMS QMHAQRKAMM GEPGKGPRED MQALIAGERF
DRSKAQALVD AKTGAVKAAS PQLIAAAGDF FDSLKPEQQA KVREFMAKRG GGRHQGMGRH
RD