8 homologs were found in PanDaTox collection
for query gene PSPA7_0012 on replicon NC_009656
Organism: Pseudomonas aeruginosa PA7



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009656  PSPA7_0012  hypothetical protein  100 
 
 
88 aa  178  3e-44  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_00130  hypothetical protein  82.76 
 
 
88 aa  155  3e-37  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0017  type IV pilus assembly PilZ  74.12 
 
 
88 aa  136  1e-31  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_0313  HAD family hydrolase  48.24 
 
 
88 aa  90.5  7e-18  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0281627 
 
 
-
 
NC_008740  Maqu_1093  type IV pilus assembly PilZ  43.37 
 
 
92 aa  71.6  4e-12  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00192328  n/a   
 
 
-
 
NC_007912  Sde_0399  hypothetical protein  36.05 
 
 
86 aa  67  8e-11  Saccharophagus degradans 2-40  Bacteria  normal  0.40238  normal 
 
 
-
 
NC_007484  Noc_2668  hypothetical protein  33.33 
 
 
97 aa  44.3  0.0005  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2619  TonB-dependent receptor  29.47 
 
 
90 aa  44.3  0.0005  Saccharophagus degradans 2-40  Bacteria  normal  0.0291507  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>