Gene Pmen_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0017 
Symbol 
ID5106692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp18721 
End bp18987 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content63% 
IMG OID640501234 
Producttype IV pilus assembly PilZ 
Protein accessionYP_001185524 
Protein GI146305059 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACC AGCGTCACCA GGTACGAACC CCGATGAAGT GCCGGATCAA GATCAGCCAC 
CCGAGTTTCG GCGAGCTGGT GGCACAGACC CGCGACCTGT CCGATAGCGG TGTCTATGTG
AAGCACCCCG ACATGACGAG CCTGACCGTC GGTGCCGAAG TGACCGGCCA GGTGCAGGAC
CTGCCGTTCC CCGCTCCGGT GTTGAAGATG GAGGTGGTGC GTGTGGACTC CGAGGGGGCC
GGTCTGCGCT TTCTCGACGA GGATTGA
 
Protein sequence
MSNQRHQVRT PMKCRIKISH PSFGELVAQT RDLSDSGVYV KHPDMTSLTV GAEVTGQVQD 
LPFPAPVLKM EVVRVDSEGA GLRFLDED