10 homologs were found in PanDaTox collection
for query gene LGAS_0963 on replicon NC_008530
Organism: Lactobacillus gasseri ATCC 33323



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008530  LGAS_0963    100 
 
 
991 bp  1965    Lactobacillus gasseri ATCC 33323  Bacteria  decreased coverage  0.0000000341038  normal 
 
 
-
 
NC_009513  Lreu_0018  ABC transporter related  83.93 
 
 
1722 bp  79.8  0.000000000001  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0745    82.52 
 
 
1773 bp  61.9  0.0000003  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.532171  n/a   
 
 
-
 
NC_005945  BAS1815  ABC transporter  86.44 
 
 
1113 bp  54  0.00008  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1954    86.44 
 
 
1761 bp  54  0.00008  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.473855  n/a   
 
 
-
 
NC_009052  Sbal_2801  ABC transporter related  92.31 
 
 
1830 bp  54  0.00008  Shewanella baltica OS155  Bacteria  normal  0.0386861  n/a   
 
 
-
 
NC_009997  Sbal195_2941  ABC transporter related  92.31 
 
 
1830 bp  54  0.00008  Shewanella baltica OS195  Bacteria  normal  0.417973  normal  0.0292535 
 
 
-
 
NC_005957  BT9727_1789  multidrug resistance ABC transporter, ATP-binding and permease  88 
 
 
1761 bp  52  0.0003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.11697  n/a   
 
 
-
 
NC_011773  BCAH820_1990  ABC transporter, permease/ATP-binding protein  88 
 
 
1761 bp  52  0.0003  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.43486e-48 
 
 
-
 
NC_011313  VSAL_II0157    93.75 
 
 
2801 bp  48.1  0.005  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>