Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2941 |
Symbol | |
ID | 5754719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 3487346 |
End bp | 3489175 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641289252 |
Product | ABC transporter related |
Protein accession | YP_001555367 |
Protein GI | 160876051 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.417973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0292535 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTAAAC GATTTGAATC TTGGGTTGAA GCCCTCCCCG ATGATGAACC GACTAAGCCA CCCACAGGGG TTTATGCTTT TTGCCGCCAC TACACTAAAG GCTACGAACT GCCGCTGATC TTAATGTCAG TGCTAACCGC TTTGCTGGCA ATGCTTGAAG TGTCCCTGTT CGGATTTATG GGCCAATTAG TGGATTGGCT GGTGAAAAAA AATCCCGAAA CCTTATTTCA AGACGAAGGC ACGACCTTAA TGCTGATGGG GGGCATGGTA CTGATTGTGA TGCCAATCTT GGTATTACTG CATGCGCTTA TCATGCATCA AACCTTGCTC GGCAATTATC CTATGTCGAT CCGTTGGCTC GCGCACCGCT ATTTGCTAAA GCAAAGTGTG TCATTTTATC AAGATGATTT TGCCGGCCGA ATCGCCACGA AAGTGATGCA AACGTCCTTA GCCGTGCGCG AAACTGTGAT GAAGTTGCTC GATGTATTGG TATACATTTT GGTGTATTTC ACTTCTATGT TAGTGATGAT CGCCAGCGCC GACCTGCGCT TAGTGATACC TATGCTAGTG TGGCTTGCAC TGTATGTAGG GCTGCAATGG TACTTTGTGC CTAAGCTGAA AAGTGTCTCT ACTGAACAAG CCGATGCGCG CTCAACCATG ACAGGCCGTA TCGTCGACAG CTATACCAAC ATCACCACAG TAAAGCTATT CGCCCACACG CAAAAAGAAG CCGAATACGC CAAATCGAGT ATGCGGATAT TTTTAGACAC GGTTTATCGC CAGATGCGCT TAGTCACGGG CATCAGCGTC AGCGTGCAGA TCATTAATTA TGTGCTCGCA TTCAGCATTG CTGCGGTAGC GATTGCTCTA TGGACTGACA GCGCGATTAC TATCGGCGCC ATTGCCATTG CGGTCAGTTT AGCACTGCGC TTAAACGGCA TGTCACAGTG GATCATGTGG GAAATCAGTT CGTTATTTGA AAACATCGGC ACAGTCACCG ATGGGATGAA CACCTTATCG AAAACAACGA TCATCCAAGA TGAGCCAGAC GCCAAGGCGC TGGTCGTCAA CCATGGCAAG ATTGATTTCA ACCAAGTGTG TTTCCATTAC GGCGAGCAGA CAGGGGTGAT TGAAGATCTG AATCTGAATA TTAAGGCAGG TGAAAAAGTT GGCTTAGTTG GGCGTTCTGG CGCGGGTAAG TCGACCTTAG TGAATCTATT AATGCGATTC TACGATGTCG AAAAAGGTCA GATTAATATT GACGATCAAG ACATTAAGAC GGTTATGCAG GATTCACTGC GCTCGCAAAT CGGCATGGTG ACCCAAGATA CATCACTGTT GCACCGTACT ATCCGCGAGA ATATTCTTTA CGGCAATCCA ACGGCCAGCG AAGAACAGCT CGATAGCGCC ATTAAACAAG CTCAAGCCTA TGACTTTATT AAGGATCTAA GTGACCCTCA CGGTAATCAT GGCTTAGATG CCCAAGTGGG TGAACGTGGT GTAAAACTTT CTGGTGGCCA AAGACAGCGT ATCGCTATTG CGCGGGTTTT ATTAAAAAAT GCGCCGATTT TGCTGCTTGA TGAAGCCACA TCTGCACTAG ATTCCGAAGT CGAAGCTGCT ATTCAAGAAA GTTTGTATGA ATTAATGCAA GGCAAGACAG TGATTGCAAT TGCTCATCGA CTTTCGACCA TTGCCGCAAT GGACAGGCTA ATCGTGTTAG ATCAAGGCCG AGTCGTCGAA CAAGGCACGC ATCAAGAACT TATTGCCGCT GGCGGTATTT ATGCTCAGCT ATGGGCACAC CAAACCGGTG GATTCTTAGG TGTAGACTAA
|
Protein sequence | MFKRFESWVE ALPDDEPTKP PTGVYAFCRH YTKGYELPLI LMSVLTALLA MLEVSLFGFM GQLVDWLVKK NPETLFQDEG TTLMLMGGMV LIVMPILVLL HALIMHQTLL GNYPMSIRWL AHRYLLKQSV SFYQDDFAGR IATKVMQTSL AVRETVMKLL DVLVYILVYF TSMLVMIASA DLRLVIPMLV WLALYVGLQW YFVPKLKSVS TEQADARSTM TGRIVDSYTN ITTVKLFAHT QKEAEYAKSS MRIFLDTVYR QMRLVTGISV SVQIINYVLA FSIAAVAIAL WTDSAITIGA IAIAVSLALR LNGMSQWIMW EISSLFENIG TVTDGMNTLS KTTIIQDEPD AKALVVNHGK IDFNQVCFHY GEQTGVIEDL NLNIKAGEKV GLVGRSGAGK STLVNLLMRF YDVEKGQINI DDQDIKTVMQ DSLRSQIGMV TQDTSLLHRT IRENILYGNP TASEEQLDSA IKQAQAYDFI KDLSDPHGNH GLDAQVGERG VKLSGGQRQR IAIARVLLKN APILLLDEAT SALDSEVEAA IQESLYELMQ GKTVIAIAHR LSTIAAMDRL IVLDQGRVVE QGTHQELIAA GGIYAQLWAH QTGGFLGVD
|
| |