10 homologs were found in PanDaTox collection
for query gene Francci3_0027 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007777  Francci3_0027  hypothetical protein  100 
 
 
509 aa  971  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0025  hypothetical protein  56.99 
 
 
97 aa  85.5  2e-15  Frankia sp. CcI3  Bacteria  normal  0.750895  normal 
 
 
-
 
NC_011891  A2cp1_0789  hypothetical protein  38.07 
 
 
314 aa  77.4  6e-13  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.204992  n/a   
 
 
-
 
NC_011891  A2cp1_0788  hypothetical protein  34.04 
 
 
373 aa  63.2  1e-08  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.174362  n/a   
 
 
-
 
NC_007777  Francci3_0026  hypothetical protein  60 
 
 
84 aa  58.2  3e-07  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_0790  hypothetical protein  38.21 
 
 
275 aa  54.3  6e-06  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.168775  n/a   
 
 
-
 
NC_007643  Rru_A1342  hypothetical protein  28.91 
 
 
238 aa  46.2  0.001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.554453  n/a   
 
 
-
 
NC_009457  VC0395_A2678  hypothetical protein  23.71 
 
 
250 aa  45.8  0.002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_1370  hypothetical protein  25.37 
 
 
134 aa  44.3  0.005  Methanospirillum hungatei JF-1  Archaea  normal  0.103597  normal  0.856261 
 
 
-
 
NC_007796  Mhun_1373  hypothetical protein  29.79 
 
 
160 aa  43.5  0.008  Methanospirillum hungatei JF-1  Archaea  hitchhiker  0.00827993  normal  0.860871 
 
 
-
 
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