Gene Francci3_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0027 
Symbol 
ID3903602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp32939 
End bp34468 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content71% 
IMG OID637877357 
Producthypothetical protein 
Protein accessionYP_479150 
Protein GI86738750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGCGC CCGGTCGTCC CCGCACGCGC GGGGATCTTC CCCTCGACGT ACACCACAAG 
CGGCTACACG CCGAGTCGTC CCCGCACGCG CGGGGATCTT CCGAGCATCC GTCGGCTCCA
GCTCGGCTGA GGCCGGTCGT CCCCGCACGC GCGGGGATCT TCCTTCGGGT GAAGAAAGCC
GCGCGCAATC GCATTCGTCG TCCCCGCACG CGCGGGGATC TTCCGCGGGG GATGAGGTCG
GCGGGCACGT GCCAGTGGTC GTCCCCGCAC GCGCGGGGAT CTTCCTTGAG ATGGACGCCG
ACCACACGGC GCGGATCGGT CGTCCCCGCA CGCGCGGGGA TCTTCCTCTG CTGTCATATC
TGGTGGGTGG AAACCGCCCG TCGTCCCCGC ACGCGCGGGG ATCTTCCCAG ATCGGACCGG
CCGGCTGGGG CTCCCACCGC GTCGTCCCCG CACGCGCGGG GATCTTCCGC GCATGGGGTT
GCAACTCCGC ACCGCCCGGC AGTCGTCCCC GCACGCGCGG GGATCTTCCG GACGAGATTG
CGGCGATCGG AAACGAGATC GTGTCGTCCC CGCACGCGCG GGGATCTTCC GCCTGGCCCG
GCCCGGCCGC GGGGTCGGGA TGAGTCGTCC CCGCACGCGC GGGGATCTTC CCTTCCCATC
GACCCACAGC TAGGCATCCT GGACGTCGTC CCCGCACGCG CGGGGATCTT CCTGGCCCAG
ACGTGGGCCG ACGACCAGCG CAATCGTCGT CCCCGCACGC GCGGGGATCT TCCTTCCAGC
CTCATCCCGC CACCAACGTC CCGCAGGTCG TCCCCGCACG CGCGGGGATC TTCCCCCGAG
GTCTTCGAGA AGGTAGAGGC TTCCCGGGTC GTCCCCGCAC GCGCGGGGAT CTTCCTAGCG
GGACCGTCCG GGGCTGCAAC CCCCGGACGG TCGTCCCCGC ACGCGCGGGG ATCTTCCCCC
GTCGTCGCTG ACCGCGCCCA ACTTCGCGGC GTCGTCCCCG CACGCGCGGG GATCTTCCCC
GTGCCCGTTC CCGGGCGATC CGCGCGCGCA TGTCGTCCCC GCACGCGCGG GGATCTTCCT
CTCGCCATCC AGAAAGTTGC CGGTTCCAGA GGGTCGTCCC CGCACGCGCG GGGATCTTCC
TGCGCCGCGA TGCGGCATGA GCGGCTTGTC GTCGTCGTCC CCGCACGCGC GGGGATCTTC
CCCTACACCA TGGACGACGT CAACGCTATG GCTGGTCGTC CCCGCACGCG CGGGGATCTT
CCTTCGGGTG AAGAAAGCCG CGCGCAATCG CATTCGTCGT CCCCGCACGC GCGGGGATCT
TCCCCTCAGA TGAGGTGGGA AAGCTTGCCT TCGCGGGTCG TCCCCGCACG CGCGGGGATC
TTCCTTGAGA TGGACGCCGA CCACACGGCG CGGATCGGTC GTCCCCGCAC GCGCGGGGAT
CTTCCCCCCC ACCCCTGTTT TCGAGGAGAC CCCACGATGT CGTCCCCGCA CGCGCGGGGA
TCTTCCCATC CAGGAAGGAG CAGACCGTGA
 
Protein sequence
MVAPGRPRTR GDLPLDVHHK RLHAESSPHA RGSSEHPSAP ARLRPVVPAR AGIFLRVKKA 
ARNRIRRPRT RGDLPRGMRS AGTCQWSSPH ARGSSLRWTP TTRRGSVVPA RAGIFLCCHI
WWVETARRPR TRGDLPRSDR PAGAPTASSP HARGSSAHGV ATPHRPAVVP ARAGIFRTRL
RRSETRSCRP RTRGDLPPGP ARPRGRDESS PHARGSSLPI DPQLGILDVV PARAGIFLAQ
TWADDQRNRR PRTRGDLPSS LIPPPTSRRS SPHARGSSPE VFEKVEASRV VPARAGIFLA
GPSGAATPGR SSPHARGSSP VVADRAQLRG VVPARAGIFP VPVPGRSARA CRPRTRGDLP
LAIQKVAGSR GSSPHARGSS CAAMRHERLV VVVPARAGIF PYTMDDVNAM AGRPRTRGDL
PSGEESRAQS HSSSPHARGS SPQMRWESLP SRVVPARAGI FLEMDADHTA RIGRPRTRGD
LPPHPCFRGD PTMSSPHARG SSHPGRSRP