15 homologs were found in PanDaTox collection
for query gene Emin_0039 on replicon NC_010644
Organism: Elusimicrobium minutum Pei191



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010644  Emin_0039  exonuclease VII small subunit  100 
 
 
75 aa  140  6e-33  Elusimicrobium minutum Pei191  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3317  exodeoxyribonuclease VII small subunit  41.54 
 
 
80 aa  50.4  0.000008  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0779  exodeoxyribonuclease VII, small subunit  48.15 
 
 
86 aa  47.8  0.00005  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.144683  normal 
 
 
-
 
NC_008347  Mmar10_0846  exodeoxyribonuclease VII small subunit  40.85 
 
 
84 aa  46.6  0.0001  Maricaulis maris MCS10  Bacteria  normal  0.136632  normal  0.343056 
 
 
-
 
NC_007955  Mbur_1514  exodeoxyribonuclease VII small subunit  42.86 
 
 
89 aa  45.4  0.0002  Methanococcoides burtonii DSM 6242  Archaea  decreased coverage  0.0000000028975  n/a   
 
 
-
 
NC_009952  Dshi_3296  exodeoxyribonuclease 7 small subunit  43.1 
 
 
80 aa  45.1  0.0004  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_0090  exodeoxyribonuclease VII small subunit  42.86 
 
 
80 aa  42.7  0.002  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2037  exodeoxyribonuclease VII, small subunit  38.89 
 
 
78 aa  42.7  0.002  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0832  exodeoxyribonuclease VII small subunit  45.28 
 
 
80 aa  42  0.003  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00000144459  n/a   
 
 
-
 
NC_007794  Saro_2254  exodeoxyribonuclease VII small subunit  40.74 
 
 
83 aa  41.6  0.004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0590284  n/a   
 
 
-
 
NC_009428  Rsph17025_2790  exodeoxyribonuclease VII, small subunit  39.68 
 
 
79 aa  41.6  0.004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.282192  normal 
 
 
-
 
NC_011832  Mpal_0528  Exonuclease VII small subunit  36.36 
 
 
60 aa  41.6  0.004  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.877558 
 
 
-
 
NC_012034  Athe_1003  exodeoxyribonuclease VII, small subunit  33.33 
 
 
86 aa  41.2  0.004  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00000898352  n/a   
 
 
-
 
NC_008553  Mthe_1169  exodeoxyribonuclease VII, small subunit  45.83 
 
 
82 aa  40.4  0.008  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_013223  Dret_1760  Exonuclease VII small subunit  40 
 
 
90 aa  40.4  0.008  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>