| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0779 |
|---|
| Symbol | |
|---|
| ID | 5455635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 845196 |
|---|
| End bp | 845456 |
|---|
| Gene Length | 261 bp |
|---|
| Protein Length | 86 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640876348 |
|---|
| Product | exodeoxyribonuclease VII, small subunit |
|---|
| Protein accession | YP_001412059 |
|---|
| Protein GI | 154251235 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1722] Exonuclease VII small subunit |
|---|
| TIGRFAM ID | [TIGR01280] exodeoxyribonuclease VII, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.144683 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCG CCAAAGCCGA AGCACATAAC GATATCGACA AGCTGAGCTT CGAGGAGGCG
TTGGCGCAGC TTGAGAAGAT CGTCGGTCAG CTCGAATCCG GCGAGGCGCC GCTTGAGAAG
TCGATTGAAC TCTATGAACG CGGCACCGCG CTGAAAGCCC ATTGCGAAAC GCGCCTGAAA
GCGGCGGAAG CGCGCGTCGA AAAGATCACC CTGTCGGCTT CAGGCGAGCC TTCGGGCACC
GAGCCGTTGG ACGTCGGCTG A
|
|---|
| Protein sequence | MSAAKAEAHN DIDKLSFEEA LAQLEKIVGQ LESGEAPLEK SIELYERGTA LKAHCETRLK
AAEARVEKIT LSASGEPSGT EPLDVG
|
|---|
| |