44 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
BbuZS7_0074  CDS  NC_011728  69517  70077  561  hypothetical protein  YP_002374603  decreased coverage  0.000683844  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0076  CDS  NC_011728  71152  72561  1410  hypothetical protein  YP_002374605  decreased coverage  0.00615233  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0080  CDS  NC_011728  75724  76404  681  ABC transporter, ATP-binding protein  YP_002374609  decreased coverage  0.0066194  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0219  CDS  NC_011728  218422  219000  579  translation elongation factor P  YP_002374739  decreased coverage  1.39055e-06  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0220  CDS  NC_011728  219166  220005  840  phosphate ABC transporter, periplasmic phosphate-binding protein  YP_002374740  decreased coverage  4.80634e-06  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0238  CDS  NC_011728  237335  237592  258  30S ribosomal protein S20  YP_002374756  decreased coverage  0.00017388  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0265  CDS  NC_011728  269853  272006  2154  transglycosylase SLT domain protein  YP_002374782  decreased coverage  0.00304053  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0266  CDS  NC_011728  271999  273015  1017  hypothetical protein  YP_002374783  decreased coverage  8.16712e-05  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0315  CDS  NC_011728  316615  317373  759  hypothetical protein  YP_002374832  decreased coverage  0.000116938  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0321  CDS  NC_011728  321408  322214  807  amino acid or sugar ABC transport systems, permease protein  YP_002374838  decreased coverage  0.000115893  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0322  CDS  NC_011728  322215  323147  933  hypothetical protein  YP_002374839  decreased coverage  0.00232188  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0324  CDS  NC_011728  324604  325656  1053  exported protein  YP_002374841  decreased coverage  7.22005e-05  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0341  CDS  NC_011728  344399  345700  1302  phosphopyruvate hydratase  YP_002374857  decreased coverage  0.00111686  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0342  CDS  NC_011728  345767  346177  411  30S ribosomal protein S9  YP_002374858  decreased coverage  0.00140539  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0348  CDS  NC_011728  350677  352773  2097  DNA helicase  YP_002374864  decreased coverage  0.00900686  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0349  CDS  NC_011728  352776  353972  1197  hypothetical protein  YP_002374865  decreased coverage  0.00827642  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0352  CDS  NC_011728  356343  357776  1434  pyruvate kinase  YP_002374868  decreased coverage  0.0043554  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0353  CDS  NC_011728  357794  358534  741  hypothetical protein  YP_002374869  decreased coverage  0.00281199  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0356  CDS  NC_011728  360524  361657  1134  hypothetical protein  YP_002374872  decreased coverage  6.8475e-05  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0399  tRNA  NC_011728  407743  407818  76  tRNA-Thr    decreased coverage  3.57697e-06  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0400  CDS  NC_011728  407892  408740  849  hypothetical protein  YP_002374913  decreased coverage  3.82173e-05  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0401  CDS  NC_011728  408754  409785  1032  putative lipoprotein  YP_002374914  decreased coverage  7.41159e-06  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0460  CDS  NC_011728  468664  469506  843  transporter, small conductance mechanosensitive ion channel (MscS) family protein  YP_002374965  decreased coverage  0.00313509  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0486  CDS  NC_011728  490245  490634  390  putative lipoprotein  YP_002374985  decreased coverage  0.000843941  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0537  CDS  NC_011728  535455  536264  810  hypothetical protein  YP_002375036  decreased coverage  0.00291593  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0538  CDS  NC_011728  536248  536862  615  hypothetical protein  YP_002375037  decreased coverage  0.00554774  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0541  CDS  NC_011728  539137  539904  768  exodeoxyribonuclease III  YP_002375040  decreased coverage  0.008532  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0624  tRNA  NC_011728  632268  632346  79  tRNA-Arg    decreased coverage  0.00406719  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0625  tRNA  NC_011728  632421  632506  86  tRNA-Leu    decreased coverage  0.00420103  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0626  tRNA  NC_011728  632508  632581  74  tRNA-Gly    decreased coverage  0.00428468  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0627    NC_011728  632714  633937  1224      decreased coverage  0.00985256  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0630  CDS  NC_011728  635855  638263  2409  ATP-dependent protease La  YP_002375118  decreased coverage  0.00470821  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0638  CDS  NC_011728  642670  644265  1596  putative beta-glucosidase  YP_002375123  decreased coverage  0.00229499  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0639  tRNA  NC_011728  644477  644553  77  tRNA-Met    decreased coverage  0.000292173  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0640  CDS  NC_011728  644564  645118  555  putative 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein  YP_002375124  decreased coverage  0.00127997  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0643  CDS  NC_011728  649898  650860  963  hypothetical protein  YP_002375127  decreased coverage  0.000581694  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0690  CDS  NC_011728  705276  706676  1401  purine-binding chemotaxis protein  YP_002375170  decreased coverage  0.00466397  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0792    NC_011728  801778  802926  1149      decreased coverage  0.000921141  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0793  CDS  NC_011728  802923  803969  1047  hypothetical protein  YP_002375263  decreased coverage  0.0073979  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0821  CDS  NC_011728  825230  826333  1104  thymidine kinase  YP_002375290  decreased coverage  0.00672514  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0837  CDS  NC_011728  848501  849790  1290  hypothetical protein  YP_002375305  decreased coverage  0.00840057  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0873    NC_011728  897844  898416  573      decreased coverage  2.03399e-06  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0874    NC_011728  898428  899300  873      decreased coverage  5.29778e-05  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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BbuZS7_0878    NC_011728  903937  904083  147      decreased coverage  8.23282e-06  n/a    Borrelia burgdorferi ZS7  Bacteria 
 
 
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