3 homologs were found in PanDaTox collection
for query gene Vapar_R0070 on replicon NC_012792
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012792  Vapar_R0070  tRNA-Gly  100 
 
 
77 bp  153  7e-36  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_R0010  tRNA-Lys  100 
 
 
97 bp  46.1  0.001  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_002978  tRNA-Gly-2  tRNA-Gly  87.23 
 
 
73 bp  46.1  0.001  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
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