10 homologs were found in PanDaTox collection
for query gene VC0395_A0339 on replicon NC_009457
Organism: Vibrio cholerae O395



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009457  VC0395_A0339  putative transcriptional regulator  100 
 
 		 159 aa  320  4e-87  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_009438  Sputcn32_2915  XRE family transcriptional regulator  52.05 
 
 		 152 aa  141  3e-33  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_3692  putative transcriptional regulator  51.01 
 
 		 152 aa  136  1e-31  Serratia proteamaculans 568  Bacteria  normal  1  normal  0.376919 
 
 
-
 
NC_012912  Dd1591_0871  transcriptional regulator, XRE family  44.14 
 
 		 170 aa  129  1.0000000000000001e-29  Dickeya zeae Ech1591  Bacteria  normal  0.56743  n/a   
 
 
-
 
NC_009654  Mmwyl1_0424  hypothetical protein  52.38 
 
 		 210 aa  121  4e-27  Marinomonas sp. MWYL1  Bacteria  normal  0.0590756  normal  1 
 
 
-
 
NC_008709  Ping_0884  DNA-binding transcriptional regulator  50.45 
 
 		 187 aa  115  3e-25  Psychromonas ingrahamii 37  Bacteria  normal  0.334392  normal  1 
 
 
-
 
NC_004347  SO_3169  Cro/CI family transcriptional regulator  41.58 
 
 		 126 aa  78.6  0.00000000000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009483  Gura_0259  XRE family transcriptional regulator  40 
 
 		 102 aa  50.4  0.00001  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000494587  n/a   
 
 
-
 
NC_010814  Glov_2518  transcriptional regulator, XRE family  33.75 
 
 		 101 aa  48.5  0.00004  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.000496163  n/a   
 
 
-
 
NC_012560  Avin_31070  DNA-binding protein  34.25 
 
 		 96 aa  47.8  0.00007  Azotobacter vinelandii DJ  Bacteria  normal  0.354613  n/a   
 
 
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