7 homologs were found in PanDaTox collection
for query gene Tpau_3884 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_3884  hypothetical protein  100 
 
 
120 aa  224  3e-58  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0570  hypothetical protein  45.3 
 
 
123 aa  70.9  0.000000000006  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0219  hypothetical protein  40.71 
 
 
145 aa  55.5  0.0000003  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0490  hypothetical protein  35.14 
 
 
121 aa  47.4  0.00007  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.625834 
 
 
-
 
NC_013159  Svir_35870  hypothetical protein  39.32 
 
 
151 aa  42  0.003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.539824  normal  0.319292 
 
 
-
 
NC_010816  BLD_1292  oligopeptide ABC transporter periplasmic protein  32.46 
 
 
125 aa  41.2  0.004  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0125  TadE-like protein  34.21 
 
 
134 aa  41.2  0.005  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>