6 homologs were found in PanDaTox collection
for query gene TM1040_R0036 on replicon NC_008044
Organism: Ruegeria sp. TM1040



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008044  TM1040_R0036  tRNA-OTHER  100 
 
 
84 bp  167  5e-40  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_6045  tRNA-Tyr  100 
 
 
84 bp  167  5e-40  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.488928  hitchhiker  0.0000000788564 
 
 
-
 
NC_007802  Jann_R0030  tRNA-OTHER  96.43 
 
 
84 bp  143  7e-33  Jannaschia sp. CCS1  Bacteria  normal  normal  0.691356 
 
 
-
 
NC_009428  RSPH17025_0  tRNA-Tyr  88.89 
 
 
84 bp  79.8  0.00000000000009  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.110365  normal  0.194602 
 
 
-
 
NC_007493  RSP_4340  tRNA-Tyr  87.5 
 
 
84 bp  71.9  0.00000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.531767  n/a   
 
 
-
 
NC_009049  RSPH17029_0  tRNA-Tyr  87.32 
 
 
84 bp  69.9  0.00000000009  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.155544 
 
 
-
 
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