14 homologs were found in PanDaTox collection
for query gene Swol_2042 on replicon NC_008346
Organism: Syntrophomonas wolfei subsp. wolfei str. Goettingen



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008346  Swol_2042  transcription attenuation protein MtrB  100 
 
 
83 aa  170  7.999999999999999e-42  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1051  transcription attenuation protein MtrB  63.16 
 
 
79 aa  105  3e-22  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0476546  n/a   
 
 
-
 
NC_013216  Dtox_0810  transcription attenuation protein MtrB  79.03 
 
 
75 aa  105  3e-22  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000157696  normal  0.0124446 
 
 
-
 
NC_013385  Adeg_0435  transcription attenuation protein MtrB  70.77 
 
 
80 aa  104  3e-22  Ammonifex degensii KC4  Bacteria  decreased coverage  0.000796315  n/a   
 
 
-
 
NC_007644  Moth_1870  transcription attenuation protein MtrB  76.67 
 
 
77 aa  103  1e-21  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1263  transcription attenuation protein MtrB  72.73 
 
 
82 aa  102  3e-21  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000628484  n/a   
 
 
-
 
NC_009012  Cthe_1263  transcription attenuation protein MtrB  75 
 
 
77 aa  100  8e-21  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.364853  n/a   
 
 
-
 
NC_009253  Dred_2317  transcription attenuation protein MtrB  75.76 
 
 
76 aa  100  8e-21  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000266369  n/a   
 
 
-
 
NC_011899  Hore_03170  transcription attenuation protein MtrB  70.59 
 
 
72 aa  99.8  1e-20  Halothermothrix orenii H 168  Bacteria  hitchhiker  2.16671e-16  n/a   
 
 
-
 
NC_011898  Ccel_1460  transcription attenuation protein MtrB  73.77 
 
 
77 aa  99  2e-20  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000746118  n/a   
 
 
-
 
NC_013411  GYMC61_0467  transcription attenuation protein MtrB  62.86 
 
 
74 aa  99.4  2e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_2152  transcription attenuation protein MtrB  66.67 
 
 
74 aa  97.8  4e-20  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000000100442  n/a   
 
 
-
 
NC_013522  Taci_0832  tryptophan RNA-binding attenuator protein  71.67 
 
 
80 aa  97.1  8e-20  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1695  hypothetical protein  73.08 
 
 
33 aa  42  0.003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
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