6 homologs were found in PanDaTox collection
for query gene Smed_4378 on replicon NC_009620
Organism: Sinorhizobium medicae WSM419



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009620  Smed_4378  hypothetical protein  100 
 
 
87 aa  176  9e-44  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2786  hypothetical protein  41.67 
 
 
99 aa  52.8  0.000002  Chelativorans sp. BNC1  Bacteria  normal  0.60853  n/a   
 
 
-
 
NC_011988  Avi_5023  hypothetical protein  34.72 
 
 
92 aa  48.1  0.00004  Agrobacterium vitis S4  Bacteria  normal  0.454124  n/a   
 
 
-
 
NC_009049  Rsph17029_1336  hypothetical protein  39.74 
 
 
84 aa  43.5  0.001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.255939 
 
 
-
 
NC_009428  Rsph17025_1217  hypothetical protein  38.16 
 
 
85 aa  43.1  0.001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.310145  normal  0.159144 
 
 
-
 
NC_007493  RSP_2678  hypothetical protein  38.46 
 
 
84 aa  42.4  0.002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
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