12 homologs were found in PanDaTox collection
for query gene Smed_3955 on replicon NC_009620
Organism: Sinorhizobium medicae WSM419



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009620  Smed_3955  hypothetical protein  100 
 
 		 69 aa  145  3e-34  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_5959  hypothetical protein  41.94 
 
 		 70 aa  57  0.00000008  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.530207 
 
 
-
 
NC_009428  Rsph17025_3107  hypothetical protein  34.38 
 
 		 68 aa  53.1  0.000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.978843  normal  0.0780089 
 
 
-
 
NC_009720  Xaut_0033  hypothetical protein  41.07 
 
 		 91 aa  51.6  0.000003  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_1582  hypothetical protein  42.62 
 
 		 71 aa  52  0.000003  Methylocella silvestris BL2  Bacteria  n/a    normal  0.247616 
 
 
-
 
NC_010725  Mpop_1774  hypothetical protein  41.07 
 
 		 68 aa  46.6  0.0001  Methylobacterium populi BJ001  Bacteria  normal  0.533444  normal  0.796842 
 
 
-
 
NC_010172  Mext_1823  hypothetical protein  39.29 
 
 		 68 aa  45.8  0.0002  Methylobacterium extorquens PA1  Bacteria  normal  0.290994  normal  1 
 
 
-
 
NC_007493  RSP_2010  hypothetical protein  28.12 
 
 		 68 aa  43.9  0.0008  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_0720  hypothetical protein  28.12 
 
 		 68 aa  43.9  0.0008  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.17913  normal  0.350983 
 
 
-
 
NC_011757  Mchl_2158  hypothetical protein  37.5 
 
 		 68 aa  43.1  0.001  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.0783 
 
 
-
 
NC_010505  Mrad2831_0522  hypothetical protein  34.38 
 
 		 68 aa  41.6  0.004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.165596  normal  0.581324 
 
 
-
 
NC_011894  Mnod_6382  hypothetical protein  35 
 
 		 70 aa  40.4  0.009  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.370175  n/a   
 
 
-
 
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